miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|29673311|gb|CB669586.1|CB669586 GTTAAAGTTAATTGCTCTCTATTTCTCAACGTTTAGGCTCAATTTTCTGTAGATAAATTCTTTCATTTATTTATGCTAGC
TTACGTTGTTCCAATATATGTCTATTTATCCTTTTCTTTTACAGTCATATCCCATGATTATCTGATCAATGCACTTCGCT
TTGTTAAGAATATGATTGCTATTATACTATTTACTACTTCCTTCGTTTCATATTATAAGACTTTCTGGCATTGCCTACAT
TCATTAACATCTATATGAATATGGGCAATGCTAGAAAGTCTTATAACCTGAAACGGAGGTAGTAGTTAAAGTATATGCCT
TAGAAACTAGATTTCTGTAGTCATAGAGTATCATAAGCAGCTGCATCCTGACTCAATTGTATATTCATCTAGGTACTTAA
GTACCTCAGTTCTTCTGGATATATTGATAAAGCTTAACTCATAATCGAAGGCAGCCTTATACACTAAATGCCATTTCTCT
CTTACCCTGTAGTTCTGCAAGAATATTGTTCTAGCAGGAGTTGGCAGTTTATCCTTGATGGATGATCATTTAGTCACAGA
GGATGATCTCAATGCAAATTTCTTAATTCCTCATGATGAGAGCATATATGGTGGTAGATCACGAGCTGAGGTTTGCTGTG
AGTCCCTGAAAGATTTCAATCCAATGGTCCGAGTTGCAGTCGAAAAGGGTGAGCCTAGTCTGGTTTTCTTCATTGGTTTG
GGTGTCAGAATTAGAAGTACATAAAGTAGGATGCCTTCTTGCATTCTTGAATTGCTCTCGTCCTAATGGTTAATCTTTGA
AT




Most similar to sp|Q8VY78|SAE1A_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8VY78|SAE1A_ARATH SUMO-activating enzyme subunit 1A
           OS=Arabidopsis thaliana GN=SAE1A PE=2 SV=1
          Length = 322

 Score =  104 bits (259), Expect = 8e-22
 Identities = 48/71 (67%), Positives = 61/71 (85%)
 Frame = +1

Query: 493 FCKNIVLAGVGSLSLMDDHLVTEDDLNANFLIPHDESIYGGRSRAEVCCESLKDFNPMVR 672
           FCKNIVLAGVGS++LMDD L   + LNANFLIP DE++Y G++ AE+C +SLKDFNPMVR
Sbjct: 46  FCKNIVLAGVGSVTLMDDRLANMEALNANFLIPPDENVYSGKTVAEICSDSLKDFNPMVR 105

Query: 673 VAVEKGEPSLV 705
           V+VEKG+ S++
Sbjct: 106 VSVEKGDLSML 116